mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qg_fs15r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:52,159 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:52,971 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:53,139 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:09,535 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:09,784 - cnv_pipe.batch.run_model - INFO - Processing cluster 989 with 179 probes
2026-06-03 05:06:10,164 - cnv_pipe.batch.run_model.cluster989 - INFO - Child process started for cluster 989 with 179 probes
2026-06-03 05:09:35,304 - cnv_pipe.batch.run_model.cluster989 - INFO - Child process finished cluster 989. Wrote cluster_989_samples.csv and cluster_989_params.csv
2026-06-03 05:09:35,307 - cnv_pipe.batch.run_model - INFO - Cluster 989 finished in 205.52 seconds. Status: SUCCESS