mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j29rgesv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:01,972 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:02,782 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:02,970 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:19,256 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:19,512 - cnv_pipe.batch.run_model - INFO - Processing cluster 725 with 188 probes
2026-06-03 05:05:19,935 - cnv_pipe.batch.run_model.cluster725 - INFO - Child process started for cluster 725 with 188 probes
2026-06-03 05:08:40,752 - cnv_pipe.batch.run_model.cluster725 - INFO - Child process finished cluster 725. Wrote cluster_725_samples.csv and cluster_725_params.csv
2026-06-03 05:08:40,755 - cnv_pipe.batch.run_model - INFO - Cluster 725 finished in 201.24 seconds. Status: SUCCESS