mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vn8qimci because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:39,982 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:40,772 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:40,940 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:56,932 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:57,019 - cnv_pipe.batch.run_model - INFO - Processing cluster 665 with 200 probes
2026-06-03 05:04:57,397 - cnv_pipe.batch.run_model.cluster665 - INFO - Child process started for cluster 665 with 200 probes
2026-06-03 05:08:31,902 - cnv_pipe.batch.run_model.cluster665 - INFO - Child process finished cluster 665. Wrote cluster_665_samples.csv and cluster_665_params.csv
2026-06-03 05:08:31,905 - cnv_pipe.batch.run_model - INFO - Cluster 665 finished in 214.89 seconds. Status: SUCCESS