File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/c35230f569147cc985b59df7e62aca/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lwu8fjfr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:01,208 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:01,992 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:02,162 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:18,473 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:18,668 - cnv_pipe.batch.run_model - INFO - Processing cluster 738 with 167 probes
2026-06-03 05:05:19,056 - cnv_pipe.batch.run_model.cluster738 - INFO - Child process started for cluster 738 with 167 probes
2026-06-03 05:08:33,703 - cnv_pipe.batch.run_model.cluster738 - INFO - Child process finished cluster 738. Wrote cluster_738_samples.csv and cluster_738_params.csv
2026-06-03 05:08:33,706 - cnv_pipe.batch.run_model - INFO - Cluster 738 finished in 195.04 seconds. Status: SUCCESS