mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xnwi6nx0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:42,897 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:43,698 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:43,873 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:00,079 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:00,317 - cnv_pipe.batch.run_model - INFO - Processing cluster 655 with 177 probes
2026-06-03 05:05:00,716 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process started for cluster 655 with 177 probes
2026-06-03 05:08:25,029 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process finished cluster 655. Wrote cluster_655_samples.csv and cluster_655_params.csv
2026-06-03 05:08:25,032 - cnv_pipe.batch.run_model - INFO - Cluster 655 finished in 204.71 seconds. Status: SUCCESS