File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/93f0b415f4882f68a438473118ea9f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wcvv7uhd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:02,121 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:02,979 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:03,158 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:18,841 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:18,917 - cnv_pipe.batch.run_model - INFO - Processing cluster 792 with 173 probes
2026-06-03 05:03:19,364 - cnv_pipe.batch.run_model.cluster792 - INFO - Child process started for cluster 792 with 173 probes
2026-06-03 05:06:10,345 - cnv_pipe.batch.run_model.cluster792 - INFO - Child process finished cluster 792. Wrote cluster_792_samples.csv and cluster_792_params.csv
2026-06-03 05:06:10,347 - cnv_pipe.batch.run_model - INFO - Cluster 792 finished in 171.43 seconds. Status: SUCCESS