mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r3d7y35k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:52,289 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:53,096 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:53,288 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:08,836 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:06:09,084 - cnv_pipe.batch.run_model - INFO - Processing cluster 961 with 199 probes
2026-06-03 05:06:09,464 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process started for cluster 961 with 199 probes
2026-06-03 05:09:37,605 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process finished cluster 961. Wrote cluster_961_samples.csv and cluster_961_params.csv
2026-06-03 05:09:37,608 - cnv_pipe.batch.run_model - INFO - Cluster 961 finished in 208.52 seconds. Status: SUCCESS