mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5grfk63g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:01,797 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:02,779 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:02,978 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:20,571 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:20,845 - cnv_pipe.batch.run_model - INFO - Processing cluster 783 with 134 probes
2026-06-03 05:03:21,280 - cnv_pipe.batch.run_model.cluster783 - INFO - Child process started for cluster 783 with 134 probes
2026-06-03 05:05:52,339 - cnv_pipe.batch.run_model.cluster783 - INFO - Child process finished cluster 783. Wrote cluster_783_samples.csv and cluster_783_params.csv
2026-06-03 05:05:52,341 - cnv_pipe.batch.run_model - INFO - Cluster 783 finished in 151.50 seconds. Status: SUCCESS