mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r5794uzk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:01,996 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:03,012 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:03,210 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:20,395 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:20,643 - cnv_pipe.batch.run_model - INFO - Processing cluster 782 with 117 probes
2026-06-03 05:03:21,068 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process started for cluster 782 with 117 probes
2026-06-03 05:05:36,257 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process finished cluster 782. Wrote cluster_782_samples.csv and cluster_782_params.csv
2026-06-03 05:05:36,259 - cnv_pipe.batch.run_model - INFO - Cluster 782 finished in 135.62 seconds. Status: SUCCESS