File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/13751d9bd4e272e4390b38176bee76/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_pjxiv2o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:07,553 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:08,425 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:08,603 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:24,957 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:25,058 - cnv_pipe.batch.run_model - INFO - Processing cluster 821 with 194 probes
2026-06-03 05:03:25,506 - cnv_pipe.batch.run_model.cluster821 - INFO - Child process started for cluster 821 with 194 probes
2026-06-03 05:06:59,595 - cnv_pipe.batch.run_model.cluster821 - INFO - Child process finished cluster 821. Wrote cluster_821_samples.csv and cluster_821_params.csv
2026-06-03 05:06:59,597 - cnv_pipe.batch.run_model - INFO - Cluster 821 finished in 214.54 seconds. Status: SUCCESS