mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nthr6nnz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:07:09,885 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:07:10,848 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:07:11,035 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:07:27,865 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:07:27,970 - cnv_pipe.batch.run_model - INFO - Processing cluster 1058 with 138 probes
2026-06-03 05:07:28,593 - cnv_pipe.batch.run_model.cluster1058 - INFO - Child process started for cluster 1058 with 138 probes
2026-06-03 05:10:07,619 - cnv_pipe.batch.run_model.cluster1058 - INFO - Child process finished cluster 1058. Wrote cluster_1058_samples.csv and cluster_1058_params.csv
2026-06-03 05:10:07,620 - cnv_pipe.batch.run_model - INFO - Cluster 1058 finished in 159.65 seconds. Status: SUCCESS