mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-201ljktc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:41,220 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:42,024 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:42,204 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:58,857 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:04:58,951 - cnv_pipe.batch.run_model - INFO - Processing cluster 987 with 186 probes
2026-06-03 05:04:59,334 - cnv_pipe.batch.run_model.cluster987 - INFO - Child process started for cluster 987 with 186 probes
2026-06-03 05:08:28,681 - cnv_pipe.batch.run_model.cluster987 - INFO - Child process finished cluster 987. Wrote cluster_987_samples.csv and cluster_987_params.csv
2026-06-03 05:08:28,684 - cnv_pipe.batch.run_model - INFO - Cluster 987 finished in 209.73 seconds. Status: SUCCESS