File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/955f6968e3dc2461f110d048bcbb1c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i8ccvikf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:05,290 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:06,321 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:06,526 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:24,759 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:25,050 - cnv_pipe.batch.run_model - INFO - Processing cluster 798 with 167 probes
2026-06-03 05:03:25,554 - cnv_pipe.batch.run_model.cluster798 - INFO - Child process started for cluster 798 with 167 probes
2026-06-03 05:06:30,583 - cnv_pipe.batch.run_model.cluster798 - INFO - Child process finished cluster 798. Wrote cluster_798_samples.csv and cluster_798_params.csv
2026-06-03 05:06:30,586 - cnv_pipe.batch.run_model - INFO - Cluster 798 finished in 185.54 seconds. Status: SUCCESS