mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ifohw39h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:00:51,337 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:00:52,285 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:00:52,486 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:01:09,287 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:01:09,372 - cnv_pipe.batch.run_model - INFO - Processing cluster 93 with 177 probes
2026-06-03 05:01:09,926 - cnv_pipe.batch.run_model.cluster93 - INFO - Child process started for cluster 93 with 177 probes
2026-06-03 05:04:07,037 - cnv_pipe.batch.run_model.cluster93 - INFO - Child process finished cluster 93. Wrote cluster_93_samples.csv and cluster_93_params.csv
2026-06-03 05:04:07,039 - cnv_pipe.batch.run_model - INFO - Cluster 93 finished in 177.67 seconds. Status: SUCCESS