File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/92e90b6075add6694d4c2388b5dd8f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q6o1k1fo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:13,951 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:14,861 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:15,068 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:31,810 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:32,051 - cnv_pipe.batch.run_model - INFO - Processing cluster 851 with 184 probes
2026-06-03 05:03:32,526 - cnv_pipe.batch.run_model.cluster851 - INFO - Child process started for cluster 851 with 184 probes
2026-06-03 05:06:54,977 - cnv_pipe.batch.run_model.cluster851 - INFO - Child process finished cluster 851. Wrote cluster_851_samples.csv and cluster_851_params.csv
2026-06-03 05:06:54,980 - cnv_pipe.batch.run_model - INFO - Cluster 851 finished in 202.93 seconds. Status: SUCCESS