mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r_pn8bf7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:43,052 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:44,094 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:44,297 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:02,355 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:05:02,455 - cnv_pipe.batch.run_model - INFO - Processing cluster 1117 with 195 probes
2026-06-03 05:05:03,141 - cnv_pipe.batch.run_model.cluster1117 - INFO - Child process started for cluster 1117 with 195 probes
2026-06-03 05:08:43,365 - cnv_pipe.batch.run_model.cluster1117 - INFO - Child process finished cluster 1117. Wrote cluster_1117_samples.csv and cluster_1117_params.csv
2026-06-03 05:08:43,369 - cnv_pipe.batch.run_model - INFO - Cluster 1117 finished in 220.91 seconds. Status: SUCCESS