File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/70a60634df30857d709132dd8011f5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i_y9t_bh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:05,463 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:06,384 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:06,587 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:23,055 - cnv_pipe.batch.run_model - INFO - Loaded data with 66 samples
2026-06-03 05:03:23,145 - cnv_pipe.batch.run_model - INFO - Processing cluster 806 with 72 probes
2026-06-03 05:03:23,719 - cnv_pipe.batch.run_model.cluster806 - INFO - Child process started for cluster 806 with 72 probes
2026-06-03 05:04:54,097 - cnv_pipe.batch.run_model.cluster806 - INFO - Child process finished cluster 806. Wrote cluster_806_samples.csv and cluster_806_params.csv
2026-06-03 05:04:54,098 - cnv_pipe.batch.run_model - INFO - Cluster 806 finished in 90.95 seconds. Status: SUCCESS