mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ne57wxrl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:24:38,914 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:24:39,691 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:24:39,856 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:25:29,872 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:25:30,018 - cnv_pipe.batch.run_model - INFO - Processing cluster 498 with 124 probes
2026-06-03 05:25:30,399 - cnv_pipe.batch.run_model.cluster498 - INFO - Child process started for cluster 498 with 124 probes
2026-06-03 05:29:04,272 - cnv_pipe.batch.run_model.cluster498 - INFO - Child process finished cluster 498. Wrote cluster_498_samples.csv and cluster_498_params.csv
2026-06-03 05:29:04,274 - cnv_pipe.batch.run_model - INFO - Cluster 498 finished in 214.26 seconds. Status: SUCCESS