mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-szwjchdp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:25:40,624 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:25:41,457 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:25:41,626 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:33,625 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:26:33,898 - cnv_pipe.batch.run_model - INFO - Processing cluster 618 with 177 probes
2026-06-03 05:26:34,293 - cnv_pipe.batch.run_model.cluster618 - INFO - Child process started for cluster 618 with 177 probes
2026-06-03 05:31:30,958 - cnv_pipe.batch.run_model.cluster618 - INFO - Child process finished cluster 618. Wrote cluster_618_samples.csv and cluster_618_params.csv
2026-06-03 05:31:30,961 - cnv_pipe.batch.run_model - INFO - Cluster 618 finished in 297.06 seconds. Status: SUCCESS