File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/d66b31a9156c4517fc354c27628377/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sgt_zuth because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:41,406 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:42,258 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:42,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:36,567 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:36,715 - cnv_pipe.batch.run_model - INFO - Processing cluster 782 with 117 probes
2026-06-03 05:27:37,221 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process started for cluster 782 with 117 probes
2026-06-03 05:31:15,278 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process finished cluster 782. Wrote cluster_782_samples.csv and cluster_782_params.csv
2026-06-03 05:31:15,280 - cnv_pipe.batch.run_model - INFO - Cluster 782 finished in 218.57 seconds. Status: SUCCESS