File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/451cc804fabf3232879c6921362609/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ccsqz_oe because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:09,416 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:10,205 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:10,378 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:29:05,393 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:29:05,573 - cnv_pipe.batch.run_model - INFO - Processing cluster 1107 with 185 probes
2026-06-03 05:29:06,117 - cnv_pipe.batch.run_model.cluster1107 - INFO - Child process started for cluster 1107 with 185 probes
2026-06-03 05:34:47,476 - cnv_pipe.batch.run_model.cluster1107 - INFO - Child process finished cluster 1107. Wrote cluster_1107_samples.csv and cluster_1107_params.csv
2026-06-03 05:34:47,480 - cnv_pipe.batch.run_model - INFO - Cluster 1107 finished in 341.91 seconds. Status: SUCCESS