mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zae4y32y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:43,205 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:44,020 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:44,186 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:38,226 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:38,489 - cnv_pipe.batch.run_model - INFO - Processing cluster 789 with 168 probes
2026-06-03 05:27:38,870 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process started for cluster 789 with 168 probes
2026-06-03 05:32:39,259 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process finished cluster 789. Wrote cluster_789_samples.csv and cluster_789_params.csv
2026-06-03 05:32:39,262 - cnv_pipe.batch.run_model - INFO - Cluster 789 finished in 300.77 seconds. Status: SUCCESS