File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/3a17907505f3fd0a12fa4a8f9580a9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r_jet9x4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:08,509 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:09,350 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:09,514 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:02,578 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:02,840 - cnv_pipe.batch.run_model - INFO - Processing cluster 696 with 170 probes
2026-06-03 05:27:03,235 - cnv_pipe.batch.run_model.cluster696 - INFO - Child process started for cluster 696 with 170 probes
2026-06-03 05:31:56,115 - cnv_pipe.batch.run_model.cluster696 - INFO - Child process finished cluster 696. Wrote cluster_696_samples.csv and cluster_696_params.csv
2026-06-03 05:31:56,118 - cnv_pipe.batch.run_model - INFO - Cluster 696 finished in 293.28 seconds. Status: SUCCESS