mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sswi3ofr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:36,920 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:37,780 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:37,962 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:34,100 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:28:34,403 - cnv_pipe.batch.run_model - INFO - Processing cluster 970 with 171 probes
2026-06-03 05:28:34,816 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process started for cluster 970 with 171 probes
2026-06-03 05:33:58,035 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process finished cluster 970. Wrote cluster_970_samples.csv and cluster_970_params.csv
2026-06-03 05:33:58,039 - cnv_pipe.batch.run_model - INFO - Cluster 970 finished in 323.64 seconds. Status: SUCCESS