mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s3ggsf36 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:37,333 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:38,219 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:38,394 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:31,350 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:31,647 - cnv_pipe.batch.run_model - INFO - Processing cluster 768 with 183 probes
2026-06-03 05:27:32,047 - cnv_pipe.batch.run_model.cluster768 - INFO - Child process started for cluster 768 with 183 probes
2026-06-03 05:32:55,668 - cnv_pipe.batch.run_model.cluster768 - INFO - Child process finished cluster 768. Wrote cluster_768_samples.csv and cluster_768_params.csv
2026-06-03 05:32:55,671 - cnv_pipe.batch.run_model - INFO - Cluster 768 finished in 324.02 seconds. Status: SUCCESS