mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ekdm5d9t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:21:50,972 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:21:51,760 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:21:51,925 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:22:42,451 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:22:42,694 - cnv_pipe.batch.run_model - INFO - Processing cluster 85 with 190 probes
2026-06-03 05:22:43,066 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process started for cluster 85 with 190 probes
2026-06-03 05:27:36,922 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process finished cluster 85. Wrote cluster_85_samples.csv and cluster_85_params.csv
2026-06-03 05:27:36,925 - cnv_pipe.batch.run_model - INFO - Cluster 85 finished in 294.23 seconds. Status: SUCCESS