mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-etoln3e2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:21:43,420 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:21:44,193 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:21:44,357 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:22:33,481 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:22:33,720 - cnv_pipe.batch.run_model - INFO - Processing cluster 51 with 199 probes
2026-06-03 05:22:34,087 - cnv_pipe.batch.run_model.cluster51 - INFO - Child process started for cluster 51 with 199 probes
2026-06-03 05:27:32,548 - cnv_pipe.batch.run_model.cluster51 - INFO - Child process finished cluster 51. Wrote cluster_51_samples.csv and cluster_51_params.csv
2026-06-03 05:27:32,551 - cnv_pipe.batch.run_model - INFO - Cluster 51 finished in 298.83 seconds. Status: SUCCESS