mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0iuxkciw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:40,576 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:41,396 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:41,568 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:35,687 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:35,960 - cnv_pipe.batch.run_model - INFO - Processing cluster 779 with 200 probes
2026-06-03 05:27:36,353 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process started for cluster 779 with 200 probes
2026-06-03 05:33:44,409 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process finished cluster 779. Wrote cluster_779_samples.csv and cluster_779_params.csv
2026-06-03 05:33:44,412 - cnv_pipe.batch.run_model - INFO - Cluster 779 finished in 368.45 seconds. Status: SUCCESS