mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-54tgo_mo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:25:46,475 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:25:47,270 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:25:47,437 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:39,675 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:26:39,816 - cnv_pipe.batch.run_model - INFO - Processing cluster 630 with 180 probes
2026-06-03 05:26:40,308 - cnv_pipe.batch.run_model.cluster630 - INFO - Child process started for cluster 630 with 180 probes
2026-06-03 05:32:03,216 - cnv_pipe.batch.run_model.cluster630 - INFO - Child process finished cluster 630. Wrote cluster_630_samples.csv and cluster_630_params.csv
2026-06-03 05:32:03,219 - cnv_pipe.batch.run_model - INFO - Cluster 630 finished in 323.40 seconds. Status: SUCCESS