mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4_wkvjlu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:25:51,290 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:25:52,118 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:25:52,286 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:43,446 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:26:43,715 - cnv_pipe.batch.run_model - INFO - Processing cluster 643 with 199 probes
2026-06-03 05:26:44,116 - cnv_pipe.batch.run_model.cluster643 - INFO - Child process started for cluster 643 with 199 probes
2026-06-03 05:32:19,246 - cnv_pipe.batch.run_model.cluster643 - INFO - Child process finished cluster 643. Wrote cluster_643_samples.csv and cluster_643_params.csv
2026-06-03 05:32:19,250 - cnv_pipe.batch.run_model - INFO - Cluster 643 finished in 335.53 seconds. Status: SUCCESS