mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ylcga8qi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:27:39,178 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:27:40,030 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:27:40,206 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:35,382 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:28:35,657 - cnv_pipe.batch.run_model - INFO - Processing cluster 987 with 186 probes
2026-06-03 05:28:36,057 - cnv_pipe.batch.run_model.cluster987 - INFO - Child process started for cluster 987 with 186 probes
2026-06-03 05:34:31,562 - cnv_pipe.batch.run_model.cluster987 - INFO - Child process finished cluster 987. Wrote cluster_987_samples.csv and cluster_987_params.csv
2026-06-03 05:34:31,565 - cnv_pipe.batch.run_model - INFO - Cluster 987 finished in 355.91 seconds. Status: SUCCESS