mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-00q74dns because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:01,542 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:02,338 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:02,505 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:56,456 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:26:56,736 - cnv_pipe.batch.run_model - INFO - Processing cluster 673 with 185 probes
2026-06-03 05:26:57,151 - cnv_pipe.batch.run_model.cluster673 - INFO - Child process started for cluster 673 with 185 probes
2026-06-03 05:32:22,275 - cnv_pipe.batch.run_model.cluster673 - INFO - Child process finished cluster 673. Wrote cluster_673_samples.csv and cluster_673_params.csv
2026-06-03 05:32:22,278 - cnv_pipe.batch.run_model - INFO - Cluster 673 finished in 325.54 seconds. Status: SUCCESS