mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rg74509m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:25:54,986 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:25:55,785 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:25:55,952 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:26:48,285 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:26:48,547 - cnv_pipe.batch.run_model - INFO - Processing cluster 653 with 166 probes
2026-06-03 05:26:48,922 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process started for cluster 653 with 166 probes
2026-06-03 05:31:33,508 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process finished cluster 653. Wrote cluster_653_samples.csv and cluster_653_params.csv
2026-06-03 05:31:33,510 - cnv_pipe.batch.run_model - INFO - Cluster 653 finished in 284.96 seconds. Status: SUCCESS