mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jc6760bp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:33,562 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:34,332 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:34,496 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:22,161 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:22,418 - cnv_pipe.batch.run_model - INFO - Processing cluster 763 with 190 probes
2026-06-03 05:27:22,783 - cnv_pipe.batch.run_model.cluster763 - INFO - Child process started for cluster 763 with 190 probes
2026-06-03 05:32:27,709 - cnv_pipe.batch.run_model.cluster763 - INFO - Child process finished cluster 763. Wrote cluster_763_samples.csv and cluster_763_params.csv
2026-06-03 05:32:27,711 - cnv_pipe.batch.run_model - INFO - Cluster 763 finished in 305.29 seconds. Status: SUCCESS