File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/652e5246b1982f3c0e60fba3b26910/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-33jz2cg7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:28:02,755 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:28:03,597 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:28:03,779 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:28:57,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:28:57,577 - cnv_pipe.batch.run_model - INFO - Processing cluster 1073 with 200 probes
2026-06-03 05:28:58,008 - cnv_pipe.batch.run_model.cluster1073 - INFO - Child process started for cluster 1073 with 200 probes
2026-06-03 05:35:09,298 - cnv_pipe.batch.run_model.cluster1073 - INFO - Child process finished cluster 1073. Wrote cluster_1073_samples.csv and cluster_1073_params.csv
2026-06-03 05:35:09,303 - cnv_pipe.batch.run_model - INFO - Cluster 1073 finished in 371.73 seconds. Status: SUCCESS