File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/e2ba2c7f022f0bae15c0fa11359044/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eg0y66xg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:14,289 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:15,256 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:15,452 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:14,515 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:14,867 - cnv_pipe.batch.run_model - INFO - Processing cluster 715 with 185 probes
2026-06-03 05:27:15,344 - cnv_pipe.batch.run_model.cluster715 - INFO - Child process started for cluster 715 with 185 probes
2026-06-03 05:33:52,086 - cnv_pipe.batch.run_model.cluster715 - INFO - Child process finished cluster 715. Wrote cluster_715_samples.csv and cluster_715_params.csv
2026-06-03 05:33:52,090 - cnv_pipe.batch.run_model - INFO - Cluster 715 finished in 397.22 seconds. Status: SUCCESS