mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yxu3aqo5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:24:31,395 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:24:32,188 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:24:32,355 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:25:23,348 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:25:23,486 - cnv_pipe.batch.run_model - INFO - Processing cluster 480 with 200 probes
2026-06-03 05:25:23,864 - cnv_pipe.batch.run_model.cluster480 - INFO - Child process started for cluster 480 with 200 probes
2026-06-03 05:30:39,706 - cnv_pipe.batch.run_model.cluster480 - INFO - Child process finished cluster 480. Wrote cluster_480_samples.csv and cluster_480_params.csv
2026-06-03 05:30:39,709 - cnv_pipe.batch.run_model - INFO - Cluster 480 finished in 316.22 seconds. Status: SUCCESS