mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3nhs2_nr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:26:42,129 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:26:42,979 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:26:43,148 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:27:37,519 - cnv_pipe.batch.run_model - INFO - Loaded data with 236 samples
2026-06-03 05:27:37,782 - cnv_pipe.batch.run_model - INFO - Processing cluster 785 with 165 probes
2026-06-03 05:27:38,158 - cnv_pipe.batch.run_model.cluster785 - INFO - Child process started for cluster 785 with 165 probes
2026-06-03 05:32:40,874 - cnv_pipe.batch.run_model.cluster785 - INFO - Child process finished cluster 785. Wrote cluster_785_samples.csv and cluster_785_params.csv
2026-06-03 05:32:40,877 - cnv_pipe.batch.run_model - INFO - Cluster 785 finished in 303.09 seconds. Status: SUCCESS