mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-97kijrth because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:59:48,144 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:59:49,097 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:59:49,276 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:00:05,592 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 05:00:05,822 - cnv_pipe.batch.run_model - INFO - Processing cluster 1007 with 198 probes
2026-06-03 05:00:06,257 - cnv_pipe.batch.run_model.cluster1007 - INFO - Child process started for cluster 1007 with 198 probes
2026-06-03 05:03:22,328 - cnv_pipe.batch.run_model.cluster1007 - INFO - Child process finished cluster 1007. Wrote cluster_1007_samples.csv and cluster_1007_params.csv
2026-06-03 05:03:22,331 - cnv_pipe.batch.run_model - INFO - Cluster 1007 finished in 196.51 seconds. Status: SUCCESS