mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3n70x6la because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:59:38,918 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:59:39,827 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:59:40,014 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:59:56,549 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:59:56,629 - cnv_pipe.batch.run_model - INFO - Processing cluster 959 with 200 probes
2026-06-03 04:59:57,086 - cnv_pipe.batch.run_model.cluster959 - INFO - Child process started for cluster 959 with 200 probes
2026-06-03 05:03:11,616 - cnv_pipe.batch.run_model.cluster959 - INFO - Child process finished cluster 959. Wrote cluster_959_samples.csv and cluster_959_params.csv
2026-06-03 05:03:11,619 - cnv_pipe.batch.run_model - INFO - Cluster 959 finished in 194.99 seconds. Status: SUCCESS