mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_it5z75r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:43,107 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:43,922 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:44,118 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:00,015 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:00,260 - cnv_pipe.batch.run_model - INFO - Processing cluster 752 with 175 probes
2026-06-03 05:09:00,640 - cnv_pipe.batch.run_model.cluster752 - INFO - Child process started for cluster 752 with 175 probes
2026-06-03 05:12:08,038 - cnv_pipe.batch.run_model.cluster752 - INFO - Child process finished cluster 752. Wrote cluster_752_samples.csv and cluster_752_params.csv
2026-06-03 05:12:08,041 - cnv_pipe.batch.run_model - INFO - Cluster 752 finished in 187.78 seconds. Status: SUCCESS