File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/8f6d9a6bc6a612559d906d7fbbb669/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wwlr8209 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:10:47,688 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:10:48,637 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:10:48,831 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:11:06,064 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:11:06,161 - cnv_pipe.batch.run_model - INFO - Processing cluster 1365 with 190 probes
2026-06-03 05:11:06,609 - cnv_pipe.batch.run_model.cluster1365 - INFO - Child process started for cluster 1365 with 190 probes
2026-06-03 05:14:22,554 - cnv_pipe.batch.run_model.cluster1365 - INFO - Child process finished cluster 1365. Wrote cluster_1365_samples.csv and cluster_1365_params.csv
2026-06-03 05:14:22,556 - cnv_pipe.batch.run_model - INFO - Cluster 1365 finished in 196.39 seconds. Status: SUCCESS