mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-28wmx32g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:10:28,385 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:10:29,656 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:10:29,894 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:10:51,443 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:10:51,694 - cnv_pipe.batch.run_model - INFO - Processing cluster 1239 with 187 probes
2026-06-03 05:10:52,246 - cnv_pipe.batch.run_model.cluster1239 - INFO - Child process started for cluster 1239 with 187 probes
2026-06-03 05:14:35,341 - cnv_pipe.batch.run_model.cluster1239 - INFO - Child process finished cluster 1239. Wrote cluster_1239_samples.csv and cluster_1239_params.csv
2026-06-03 05:14:35,343 - cnv_pipe.batch.run_model - INFO - Cluster 1239 finished in 223.65 seconds. Status: SUCCESS