File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/db2ef6ac363f055d31682f0715b093/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4_im8vyx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:10:21,671 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:10:22,681 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:10:22,879 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:10:40,402 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:10:40,662 - cnv_pipe.batch.run_model - INFO - Processing cluster 1222 with 99 probes
2026-06-03 05:10:41,107 - cnv_pipe.batch.run_model.cluster1222 - INFO - Child process started for cluster 1222 with 99 probes
2026-06-03 05:12:27,452 - cnv_pipe.batch.run_model.cluster1222 - INFO - Child process finished cluster 1222. Wrote cluster_1222_samples.csv and cluster_1222_params.csv
2026-06-03 05:12:27,453 - cnv_pipe.batch.run_model - INFO - Cluster 1222 finished in 106.79 seconds. Status: SUCCESS