mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yo8e1or9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:48,746 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:49,533 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:49,702 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:06,109 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:06,327 - cnv_pipe.batch.run_model - INFO - Processing cluster 623 with 55 probes
2026-06-03 05:09:06,712 - cnv_pipe.batch.run_model.cluster623 - INFO - Child process started for cluster 623 with 55 probes
2026-06-03 05:10:09,734 - cnv_pipe.batch.run_model.cluster623 - INFO - Child process finished cluster 623. Wrote cluster_623_samples.csv and cluster_623_params.csv
2026-06-03 05:10:09,735 - cnv_pipe.batch.run_model - INFO - Cluster 623 finished in 63.41 seconds. Status: SUCCESS