mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0kdukg8c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:45,468 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:46,293 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:46,475 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:02,528 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:02,777 - cnv_pipe.batch.run_model - INFO - Processing cluster 664 with 154 probes
2026-06-03 05:09:03,215 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process started for cluster 664 with 154 probes
2026-06-03 05:11:55,427 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process finished cluster 664. Wrote cluster_664_samples.csv and cluster_664_params.csv
2026-06-03 05:11:55,430 - cnv_pipe.batch.run_model - INFO - Cluster 664 finished in 172.65 seconds. Status: SUCCESS