mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s4ae5d9l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:47,731 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:48,587 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:48,802 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:05,273 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:05,507 - cnv_pipe.batch.run_model - INFO - Processing cluster 640 with 157 probes
2026-06-03 05:09:05,890 - cnv_pipe.batch.run_model.cluster640 - INFO - Child process started for cluster 640 with 157 probes
2026-06-03 05:12:00,959 - cnv_pipe.batch.run_model.cluster640 - INFO - Child process finished cluster 640. Wrote cluster_640_samples.csv and cluster_640_params.csv
2026-06-03 05:12:00,962 - cnv_pipe.batch.run_model - INFO - Cluster 640 finished in 175.45 seconds. Status: SUCCESS