File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/bb329b273ea649eec09d38bdd412d6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3nn2oobe because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:45,882 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:46,745 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:46,928 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:09:02,855 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:09:02,942 - cnv_pipe.batch.run_model - INFO - Processing cluster 811 with 184 probes
2026-06-03 05:09:03,450 - cnv_pipe.batch.run_model.cluster811 - INFO - Child process started for cluster 811 with 184 probes
2026-06-03 05:12:21,457 - cnv_pipe.batch.run_model.cluster811 - INFO - Child process finished cluster 811. Wrote cluster_811_samples.csv and cluster_811_params.csv
2026-06-03 05:12:21,460 - cnv_pipe.batch.run_model - INFO - Cluster 811 finished in 198.52 seconds. Status: SUCCESS