mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x9u9izt2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:08:01,781 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:08:02,819 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:08:03,029 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:08:21,370 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:08:21,475 - cnv_pipe.batch.run_model - INFO - Processing cluster 580 with 200 probes
2026-06-03 05:08:22,153 - cnv_pipe.batch.run_model.cluster580 - INFO - Child process started for cluster 580 with 200 probes
2026-06-03 05:11:56,207 - cnv_pipe.batch.run_model.cluster580 - INFO - Child process finished cluster 580. Wrote cluster_580_samples.csv and cluster_580_params.csv
2026-06-03 05:11:56,209 - cnv_pipe.batch.run_model - INFO - Cluster 580 finished in 214.73 seconds. Status: SUCCESS