mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mtghcyi7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:02,879 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:03,861 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:04,061 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:22,543 - cnv_pipe.batch.run_model - INFO - Loaded data with 68 samples
2026-06-03 05:06:22,642 - cnv_pipe.batch.run_model - INFO - Processing cluster 0 with 137 probes
2026-06-03 05:06:23,125 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process started for cluster 0 with 137 probes
2026-06-03 05:09:05,296 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process finished cluster 0. Wrote cluster_0_samples.csv and cluster_0_params.csv
2026-06-03 05:09:05,297 - cnv_pipe.batch.run_model - INFO - Cluster 0 finished in 162.66 seconds. Status: SUCCESS